Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.400 GeneticVariation group BEFREE • Functional polymorphisms on the VEGF-A gene, known to be linked to cancer risk or to VEGF-A plasma concentrations, have been identified. 21204912 2011
Entrez Id: 2597
Gene Symbol: GAPDH
GAPDH
0.100 Biomarker group BEFREE • Cycle threshold values were normalized with glyceraldehyde 3-phosphate dehydrogenase in cancer cells and mononucleated cells, yielding comparative specific expression values from the relative quantification method with the help of the standard curve method for each patient and each gene locus. 23046102 2012
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.400 AlteredExpression group BEFREE χ<sup>2</sup> analysis revealed that upregulation of ROCK1 was significantly associated with advanced N stage (P=0.032) cancer and increased PIK3CA expression was significantly associated with advanced N stage (P=0.027) and TNM stage (P=0.019) cancer. 28450943 2017
Entrez Id: 6093
Gene Symbol: ROCK1
ROCK1
0.100 AlteredExpression group BEFREE χ<sup>2</sup> analysis revealed that upregulation of ROCK1 was significantly associated with advanced N stage (P=0.032) cancer and increased PIK3CA expression was significantly associated with advanced N stage (P=0.027) and TNM stage (P=0.019) cancer. 28450943 2017
Entrez Id: 5071
Gene Symbol: PRKN
PRKN
0.100 Biomarker group BEFREE Νeuronal precursor cell expressed and developmentally downregulated protein (Nedd4-1) is an E3 ubiquitin ligase with critical roles in the pathogenesis of cancer. 28405688 2017
Entrez Id: 158506
Gene Symbol: CBLL2
CBLL2
0.100 Biomarker group BEFREE Νeuronal precursor cell expressed and developmentally downregulated protein (Nedd4-1) is an E3 ubiquitin ligase with critical roles in the pathogenesis of cancer. 28405688 2017
Entrez Id: 79594
Gene Symbol: MUL1
MUL1
0.100 Biomarker group BEFREE Νeuronal precursor cell expressed and developmentally downregulated protein (Nedd4-1) is an E3 ubiquitin ligase with critical roles in the pathogenesis of cancer. 28405688 2017
Entrez Id: 4734
Gene Symbol: NEDD4
NEDD4
0.090 Biomarker group BEFREE Νeuronal precursor cell expressed and developmentally downregulated protein (Nedd4-1) is an E3 ubiquitin ligase with critical roles in the pathogenesis of cancer. 28405688 2017
Entrez Id: 9734
Gene Symbol: HDAC9
HDAC9
0.100 Biomarker group BEFREE ΔNp63/DGCR8-Dependent MicroRNAs Mediate Therapeutic Efficacy of HDAC Inhibitors in Cancer. 27300436 2016
Entrez Id: 54487
Gene Symbol: DGCR8
DGCR8
0.040 Biomarker group BEFREE ΔNp63/DGCR8-Dependent MicroRNAs Mediate Therapeutic Efficacy of HDAC Inhibitors in Cancer. 27300436 2016
Entrez Id: 11119
Gene Symbol: BTN3A1
BTN3A1
0.020 Biomarker group BEFREE γ9δ2T cells, which express Vγ9 and Vδ2 chains of the T cell receptor (TCR), mediate cancer immune surveillance by sensing early metabolic changes in malignant leukemic blast and not their healthy hematopoietic stem counterparts via the γ9δ2TCR targeting joined conformational and spatial changes of CD277 at the cell membrane (CD277J). 30871629 2019
Entrez Id: 11118
Gene Symbol: BTN3A2
BTN3A2
0.010 Biomarker group BEFREE γ9δ2T cells, which express Vγ9 and Vδ2 chains of the T cell receptor (TCR), mediate cancer immune surveillance by sensing early metabolic changes in malignant leukemic blast and not their healthy hematopoietic stem counterparts via the γ9δ2TCR targeting joined conformational and spatial changes of CD277 at the cell membrane (CD277J). 30871629 2019
Entrez Id: 3014
Gene Symbol: H2AX
H2AX
0.100 Biomarker group BEFREE γ-H2AX expression could be a potential biomarker for cancer diagnosis and prediction, and further studies are in need. 30920061 2019
Entrez Id: 3014
Gene Symbol: H2AX
H2AX
0.100 AlteredExpression group BEFREE γ-H2AX is a marker of activated DNA damage and is overexpressed in many malignancies and their precursor lesions. 21185067 2011
Entrez Id: 4249
Gene Symbol: MGAT5
MGAT5
0.040 GeneticVariation group BEFREE β1,6-N-acetylglucosaminyltransferase V (MGAT5), which is required for the biosynthesis of β1,6GlcNAc-branched N-linked glycans attached to cell surface and secreted glycoproteins, accounts for oncogenic growth signal transduction during the development and progression of various malignancies. 25630622 2015
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.100 AlteredExpression group BEFREE β-catenin/Tcf4 complex is one such protein-protein complex found altered in colorectal epithelial cells resulting in activation of target genes leading to cancer. 29455637 2019
Entrez Id: 2122
Gene Symbol: MECOM
MECOM
0.100 Biomarker group BEFREE β-catenin mediated EVI1's function on cancer stem cells (CSCs) properties. 30770775 2019
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.100 Biomarker group BEFREE β-catenin mediated EVI1's function on cancer stem cells (CSCs) properties. 30770775 2019
Entrez Id: 960
Gene Symbol: CD44
CD44
0.100 Biomarker group BEFREE β-Catenin and TG2 was also upregulated in SW620 spheroid cells enriched with cancer stem cell marker CD44 and TG2 inhibition/knockdown reduced the spheroid forming potential of SW620 cells. 28223538 2017
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.400 AlteredExpression group BEFREE β-catenin and cyclin D1 are proto-oncogene that is overexpressed in many types of cancers and leads to cancer development. 24712725 2014
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.100 Biomarker group BEFREE β-blocker and angiotensin-converting enzyme inhibitor therapy to mitigate cardiotoxicity during cancer therapy was associated with a decline in serum troponins (OR 4.1, 95% CI 1.7-9.8; n = 466). 31721381 2020
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.090 Biomarker group BEFREE β-arrestin1-mediated acetylation of Gli1 regulates Hedgehog/Gli signaling and modulates self-renewal of SHH medulloblastoma cancer stem cells. 28716052 2017
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.400 Biomarker group BEFREE αHER2/PLD specifically accumulated doxorubicin in the nucleus of cancer cells in tumor-bearing mice and produced significantly greater antitumor activity against MCF7/HER2 (P < 0.0001) and MDA-MB-361 (P < 0.05) tumors as compared to untargeted PLD. 31251311 2019
Entrez Id: 3164
Gene Symbol: NR4A1
NR4A1
0.100 Biomarker group BEFREE α6- and β4-integrins as well as α5- and β1-integrins are Sp-regulated genes that are also coregulated by the orphan nuclear receptor NR4A1 and these integrins can be targeted by agents such as penfluridol that suppress Sp1, Sp3, and Sp4 and also by NR4A1 antagonists.Mol Cancer Ther; 16(1); 205-16.©2016 AACR. 27811009 2017
Entrez Id: 23452
Gene Symbol: ANGPTL2
ANGPTL2
0.100 Biomarker group BEFREE α5β1 integrin recycling promotes Arp2/3-independent cancer cell invasion via the formin FHOD3. 26370503 2015